{ "_id": "6a33dd143efcd9bda43b78f0", "Package": "NPP", "Type": "Package", "Title": "Normalized Power Prior Bayesian Analysis", "Version": "0.7.0", "Authors@R": "c(person(given = \"Zifei\",\nfamily = \"Han\",\nrole = c(\"aut\", \"cre\"),\nemail = \"hanzifei1@gmail.com\"),\nperson(given = \"Qiang\",\nfamily = \"Zhang\",\nrole = \"aut\"),\nperson(given = \"Tianyu\",\nfamily = \"Bai\",\nrole = \"aut\"),\nperson(given = \"Yuyan\",\nfamily = \"Duan\",\nrole = \"aut\"),\nperson(given = \"Keying\",\nfamily = \"Ye\",\nrole = \"aut\"))", "Maintainer": "Zifei Han ", "Description": "Posterior sampling in several commonly used distributions\nusing normalized power prior as described in Duan, Ye and Smith\n(2006) and Ibrahim et.al. (2015)\n. Sampling of the power parameter is\nachieved via either independence Metropolis-Hastings or random\nwalk Metropolis-Hastings based on transformation.", "License": "GPL (>= 2)", "LazyData": "true", "Encoding": "UTF-8", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-18 11:32:57 UTC", "User": "root" }, "Author": "Zifei Han [aut, cre], Qiang Zhang [aut], Tianyu Bai [aut],\nYuyan Duan [aut], Keying Ye [aut]", "Repository": "https://hanzifei.r-universe.dev", "Date/Publication": "2025-08-20 22:34:50 UTC", "RemoteUrl": "https://github.com/cran/NPP", "RemoteRef": "HEAD", "RemoteSha": "9b48aa60ec480324ee81c3870771fb7c7febf996", "MD5sum": "2340ef93d20d73111968cf0ce588dbdd", "_user": "hanzifei", "_type": "src", "_file": "NPP_0.7.0.tar.gz", "_fileid": "4ce0ef7ffbf6ac44817e3e6ed98d1ba6cd1e3b46fa8c173096045040e492e9e4", "_filesize": 395341, "_sha256": "4ce0ef7ffbf6ac44817e3e6ed98d1ba6cd1e3b46fa8c173096045040e492e9e4", "_created": "2026-06-18T11:32:57.000Z", "_published": "2026-06-18T11:57:08.507Z", "_distro": "noble", "_jobs": [ { "job": 82120461670, "time": 1144, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7722569940" }, { "job": 82120461675, "time": 115, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7722214593" }, { "job": 82120461659, "time": 166, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7722220536" }, { "job": 82120461661, "time": 160, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7722220713" }, { "job": 82113753436, "time": 2366, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7722174834" }, { "job": 82120461636, "time": 86, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7722205295" }, { "job": 82120461724, "time": 82, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7722203975" }, { "job": 82120461684, "time": 69, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7722199521" }, { "job": 82120461669, "time": 104, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7722211813" } ], "_buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/NPP", "_commit": { "id": "9b48aa60ec480324ee81c3870771fb7c7febf996", "author": "Zifei Han ", "committer": "cran-robot ", "message": "version 0.7.0\n", "time": 1755729290 }, "_maintainer": { "name": "Zifei Han", "email": "hanzifei1@gmail.com", "login": "hanzifei", "description": "", "uuid": 10103163 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "MASS", "role": "Imports" }, { "package": "mvtnorm", "role": "Imports" }, { "package": "KernSmooth", "role": "Imports" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-34", "n": 1 } ], "_tags": [ { "name": "0.7.0", "date": "2025-08-20" } ], "_stars": 0, "_contributors": [ { "user": "hanzifei", "count": 7, "uuid": 10103163 } ], "_userbio": { "uuid": 10103163, "type": "user", "name": "Zifei Han", "followers": 2 }, "_downloads": { "count": 232, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/NPP" }, "_mentions": 3, "_searchresults": 1, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NPP.html", "manual.pdf" ], "_realowner": "hanzifei", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2019-07-11" }, { "version": "0.2.0", "date": "2019-08-21" }, { "version": "0.3.0", "date": "2021-01-14" }, { "version": "0.4.0", "date": "2021-04-23" }, { "version": "0.5.0", "date": "2023-09-18" }, { "version": "0.6.0", "date": "2023-12-12" }, { "version": "0.7.0", "date": "2025-08-20" } ], "_exports": [ "BerMNPP_MCMC1", "BerMNPP_MCMC2", "BerNPP_MCMC", "BerOMNPP_MCMC1", "BerOMNPP_MCMC2", "IRTNPP", "LaplacelogC", "LMMNPP_MCMC1", "LMMNPP_MCMC2", "LMNPP_MCMC", "LMOMNPP_MCMC1", "LMOMNPP_MCMC2", "logCdelta", "logCknot", "loglikBerD0", "loglikNormD0", "ModeDeltaBerNPP", "ModeDeltaLMNPP", "ModeDeltaMultinomialNPP", "ModeDeltaNormalNPP", "ModeDeltaPoisNPP", "MultinomialNPP_MCMC", "NormalNPP_MCMC", "PoiMNPP_MCMC1", "PoiMNPP_MCMC2", "PoiOMNPP_MCMC1", "PoiOMNPP_MCMC2", "PoissonNPP_MCMC" ], "_datasets": [ { "name": "PHData", "title": "PH Data on four sites in Virginia", "object": "PHData", "class": [ "data.frame" ], "fields": [ "Station", "Data.Time", "PH" ], "rows": 325, "table": true, "tojson": true }, { "name": "SPDData", "title": "Dataset for Diagnostic Test (PartoSure Test, Medical Device) Evaluation for Spontaneous Preterm Delivery", "object": "SPDData", "class": [ "data.frame" ], "fields": [ "Data.Region", "TPDP", "TPDN", "TNDP", "TNDN" ], "rows": 2, "table": true, "tojson": true }, { "name": "VaccineData", "title": "Dataset of a Vaccine Trial for RotaTeq and Multiple Historical Trials for Control Group", "object": "VaccineData", "class": [ "data.frame" ], "fields": [ "Data.Time", "StudyID", "Group", "Start.Year", "End.Year", "N", "y" ], "rows": 6, "table": true, "tojson": true } ], "_help": [ { "page": "BerMNPP_MCMC1", "title": "MCMC Sampling for Bernoulli Population with Multiple Historical Data using Normalized Power Prior", "topics": [ "BerMNPP_MCMC1" ] }, { "page": "BerMNPP_MCMC2", "title": "MCMC Sampling for Bernoulli Population of multiple historical data using Normalized Power Prior", "topics": [ "BerMNPP_MCMC2" ] }, { "page": "BerNPP", "title": "MCMC Sampling for Bernoulli Population using Normalized Power Prior", "topics": [ "BerNPP_MCMC" ] }, { "page": "BerOMNPP_MCMC1", "title": "MCMC Sampling for Bernoulli Population of multiple ordered historical data using Normalized Power Prior", "topics": [ "BerOMNPP_MCMC1" ] }, { "page": "BerOMNPP_MCMC2", "title": "MCMC Sampling for Bernoulli Population of multiple ordered historical data using Normalized Power Prior", "topics": [ "BerOMNPP_MCMC2" ] }, { "page": "IRTNPP", "title": "MCMC Sampling for IRT Model Ability Parameters using Normalized Power Prior", "topics": [ "IRTNPP" ] }, { "page": "LaplacelogC", "title": "A Function to Calculate logC(delta) Based on Laplace Approximation", "topics": [ "LaplacelogC" ] }, { "page": "LMMNPP_MCMC1", "title": "MCMC Sampling for Linear Regression Model of multiple historical data using Normalized Power Prior", "topics": [ "LMMNPP_MCMC1" ] }, { "page": "LMMNPP_MCMC2", "title": "MCMC Sampling for Linear Regression Model of multiple historical data using Normalized Power Prior", "topics": [ "LMMNPP_MCMC2" ] }, { "page": "LMNPP", "title": "MCMC Sampling for Normal Linear Model using Normalized Power Prior", "topics": [ "LMNPP_MCMC" ] }, { "page": "LMOMNPP_MCMC1", "title": "MCMC Sampling for Linear Regression Model of multiple historical data using Ordered Normalized Power Prior", "topics": [ "LMOMNPP_MCMC1" ] }, { "page": "LMOMNPP_MCMC2", "title": "MCMC Sampling for Linear Regression Model of multiple historical data using Ordered Normalized Power Prior", "topics": [ "LMOMNPP_MCMC2" ] }, { "page": "logCdelta", "title": "A Function to Interpolate logC(delta) Based on Its Values on Selected Knots", "topics": [ "logCdelta" ] }, { "page": "logCknot", "title": "A Function to Calculate logC(delta) on Selected Knots", "topics": [ "logCknot" ] }, { "page": "loglikBerD0", "title": "A Function to Calculate Log-likelihood of the Historical Data, Given Matrix-valued Parameters, for Bernoulli Population", "topics": [ "loglikBerD0" ] }, { "page": "loglikNormD0", "title": "A Function to Calculate Log-likelihood of the Historical Data, Given Array-valued Parameters, for Normal Population", "topics": [ "loglikNormD0" ] }, { "page": "ModeDeltaBerNPP", "title": "Calculate Posterior Mode of the Power Parameter in Normalized Power Prior with Grid Search, Bernoulli Population", "topics": [ "ModeDeltaBerNPP" ] }, { "page": "ModeDeltaLMNPP", "title": "Calculate Posterior Mode of the Power Parameter in Normalized Power Prior with Grid Search, Normal Linear Model", "topics": [ "ModeDeltaLMNPP" ] }, { "page": "ModeDeltaMultinomialNPP", "title": "Calculate Posterior Mode of the Power Parameter in Normalized Power Prior with Grid Search, Multinomial Population", "topics": [ "ModeDeltaMultinomialNPP" ] }, { "page": "ModeDeltaNormalNPP", "title": "Calculate Posterior Mode of the Power Parameter in Normalized Power Prior with Grid Search, Normal Population", "topics": [ "ModeDeltaNormalNPP" ] }, { "page": "ModeDeltaPoisNPP", "title": "Calculate Posterior Mode of the Power Parameter in Normalized Power Prior with Grid Search, Poisson Population", "topics": [ "ModeDeltaPoisNPP" ] }, { "page": "MultinomialNPP", "title": "MCMC Sampling for Multinomial Population using Normalized Power Prior", "topics": [ "MultinomialNPP_MCMC" ] }, { "page": "NormalNPP", "title": "MCMC Sampling for Normal Population using Normalized Power Prior", "topics": [ "NormalNPP_MCMC" ] }, { "page": "PHData", "title": "PH Data on four sites in Virginia", "topics": [ "PHData" ] }, { "page": "PoiMNPP_MCMC1", "title": "MCMC Sampling for Poisson Population using Normalized Power Prior with Multiple Historical Data", "topics": [ "PoiMNPP_MCMC1" ] }, { "page": "PoiMNPP_MCMC2", "title": "MCMC Sampling for Poisson Population of multiple historical data using Normalized Power Prior", "topics": [ "PoiMNPP_MCMC2" ] }, { "page": "PoiOMNPP_MCMC1", "title": "MCMC Sampling for Poisson Population of multiple ordered historical data using Normalized Power Prior", "topics": [ "PoiOMNPP_MCMC1" ] }, { "page": "PoiOMNPP_MCMC2", "title": "MCMC Sampling for Poisson Population of multiple ordered historical data using Normalized Power Prior", "topics": [ "PoiOMNPP_MCMC2" ] }, { "page": "PoissonNPP", "title": "MCMC Sampling for Bernoulli Population using Normalized Power Prior", "topics": [ "PoissonNPP_MCMC" ] }, { "page": "SPDData", "title": "Dataset for Diagnostic Test (PartoSure Test, Medical Device) Evaluation for Spontaneous Preterm Delivery", "topics": [ "SPDData" ] }, { "page": "VaccineData", "title": "Dataset of a Vaccine Trial for RotaTeq and Multiple Historical Trials for Control Group", "topics": [ "VaccineData" ] } ], "_rundeps": [ "KernSmooth", "MASS", "mvtnorm" ], "_score": 1.4771212547196624, "_indexed": true, "_nocasepkg": "npp", "_universes": [ "hanzifei" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.7.0", "date": "2026-06-18T11:53:42.000Z", "distro": "noble", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "2bacf99807af83fbe47a820e6dde1f018da9ed5c03b0815b0cab3c14515ae996", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.6.0", "os": "linux", "version": "0.7.0", "date": "2026-06-18T11:39:12.000Z", "distro": "noble", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "d8885211ddb65baef952bb010c1629a5bfacd56d70789b2ce4d7beb3ecd42434", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.5.3", "os": "mac", "version": "0.7.0", "date": "2026-06-18T11:39:37.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "901990e995ee5bcbe390b7665c198f28d43a58fc826f0119ffa6fdb7f7cf93fa", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.6.0", "os": "mac", "version": "0.7.0", "date": "2026-06-18T11:39:36.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "071e1989bed7739664512661cc51322e27ed53dc38c6e364e9d16e051ad7308a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.6.0", "os": "wasm", "version": "0.7.0", "date": "2026-06-18T11:39:06.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "24a96fa1497ce0aac2c25596ae103c9ebd5a44d1c05b5b451b2fb53fcc054849", "status": "success", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.7.0", "os": "win", "version": "0.7.0", "date": "2026-06-18T11:38:35.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "54d573de4e02e068925796e36ef4e61b397cfcaecab493fe9bfa6ac7e3845ae9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.5.3", "os": "win", "version": "0.7.0", "date": "2026-06-18T11:38:21.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "5ba5d4e1ec40521efdcb9a9c721bef18945bcc2f1f37fccc394cbd7fdb99066e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" }, { "r": "4.6.0", "os": "win", "version": "0.7.0", "date": "2026-06-18T11:38:57.000Z", "commit": "9b48aa60ec480324ee81c3870771fb7c7febf996", "fileid": "ba35f0a5bad78a32b09562966da413249a2690295f831083c0c4402fb2d0eb69", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/hanzifei/actions/runs/27754743774" } ] }